Introduction to Circos, Features and Uses // CIRCOS Circular Genome Data Visualization
Sandro Sousa
layout (2363) node (605) edge (572) plot (291) hive (165) network visualization (9) hairball (8) hive plot (1) linear layout (1) genome informatics 2010 (1)
the hive plot is a perceptually uniform and scalable linear layout visualization for network visual analytics UNDERSTANDING NETWORK STRUCTURE WITH HIVE PLOTS.
(A) Normalized (top) and absolute (bottom) connectivity of E. coli gene regulatory network and Linux function call network ( Yan et al. ) (B) Gene co-regulation networks in neuroblastoma samples. (C) Network edges shown as ribbons creating circularly composited stacked bar plots (a periodic streamgraph). (D) Syntenic network of three modern crucifer species to ancestral genome. (E) Layered network correlation matrix. In each cell two layers u , v are depicted with u used to order axes and nodes while links
Join the discussion (Rich Morin) about hive plots in d3.js ( demo , github ). New to hive plots? See this Useful d3.js + hive plot intro by Mike Bostock. Hive plots — for the impatient The hive plot is a rational visualization method for drawing networks. Nodes are mapped to and positioned on radially distributed linear axes — this mapping is based on network structural properties. Edges are drawn as curved links. Simple and interpretable. The purpose of the hive plot is to establish a new baseline for visu
Introduction to Circos, Features and Uses // CIRCOS Circular Genome Data Visualization
Sandro Sousa